Function reference
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append_region_index()
- Extract Region Index from Spatial Object and Partition Training and Testing Data
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cast_date_string()
- Convert Date String to Date Object
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create_forecast_template()
- Create a Forecast Template
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download_boundaries()
- Download US Boundaries
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extract_forecasts()
- Extract forecasts from a model
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forecast_time_series()
- Forecast Time Series
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getPovertyPop()
- Returns a merged dataframe with poverty and population data by state for specified age range.
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get_api()
- Get API key from secrets.yaml file
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get_covid19_obs()
- Obtain COVID-19 Observation Data
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get_hub_forecasts()
- Get COVID-19 forecasts from various sources
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get_model_name()
- Get the model name from a filename
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get_neighbors()
- Get Neighbors of Polygons
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inla_dlm()
- Dynamic Linear Model using INLA
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plot_forecasts_compare()
- Plot comparison of forecasts
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plot_location()
- Plot Location
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plot_neighbors()
- Plots neighborhood adjacency
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plot_WIS_lines()
- Plot WIS Lines Function
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propose_weights()
- Create model weights based on ranking and apply to forecast data
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Rt_projection()
- Project Rt values using ARIMA or DLM method
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run_model_list()
- Run a series of INLA models
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score_MAE()
- Calculate Mean Absolute Error given forecast and truth data
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score_WIS()
- Score WIS function
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setup_analysis()
- Function to set up CovidCAR analysis
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time_index()
- Generate a temporal index for a given set of dates